Documentation


 

Screen shots


 
Interactive (left) and Batch (right) running modes of MuSERA
interfaces
 
Overview plot of combining evidence in multiple replicates
overview
 
Interactive genome browser integrated in MuSERA with zoom-in, zoom-out and pan functionalities to see how enriched regions on replicates are evaluated, and how they co-localize with known genomic features such as promoter regions.
genomeBrowser
 
Single-click p-value distribution plot to easily compare the distribution of enriched region p-values across replicates.
p-value distribution
 
Distribution of enriched region p-values in different computed enriched region sets
ER Classification
 
Nearest neighbor analysis allows checking how close the enriched regions of different computed sets are, e.g., in this example, stringent-confirmed enriched regions are mainly very close to each other.
nnd
 
Distribution of combined evidence in a single-click!
xsquared
 
Fast and easily customizable functional analysis integrated in MuSERA: allows plotting the distances between enriched regions from different sets and known genomic features.
funcAna
 
MuSERA provides all the information chromosome-wide: e.g., an overview of the results of the analysis of different sets of enriched regions stratified by chromosome.
ChrWide